Einar Eg Nielsen

Einar Eg Nielsen

Professor

DTU AQUA
Institut for Akvatiske Ressourcer

Sektion for Marine Levende Ressourcer

Danmarks Tekniske Universitet

Vejlsøvej 39

8600 Silkeborg

Få tilsendt vCard på e-mail.

Publikationer
Projekter
Aktiviteter
Kurser
CV
DTU nyheder
Loading

Publikationer rss feed

2019
  PDF

Author Correction: Gene-associated markers provide tools for tackling illegal fishing and false eco-certification

Nielsen, Einar E ; Cariani, Alessia ; Aoidh, Eoin Mac ; Maes, Gregory E ; Milano, Ilaria ; Ogden, Rob ; Taylor, Martin ; Hansen, Jakob Hemmer ; Babbucci, Massimiliano ; Bargelloni, Luca ; Bekkevold, Dorte ; Diopere, Eveline ; Grenfell, Leonie ; Helyar, Sarah ; Limborg, Morten Tønsberg ; Martinsohn, Jann T ; McEwing, Ross ; Panitz, Frank ; Patarnello, Tomaso ; Tinti, Fausto ; Van Houdt, Jeroen K J ; Volckaert, Filip A M ; Waples, Robin S ; FishPopTrace, Consortium ; Carvalho, Gary R
in: Nature Communications, vol: 10, issue: 1, pages: 5325

Type: Comment/debate (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1038/s41467-019-13399-5

 

DNA-analysis to monitor fisheries and aquaculture: Too costly?

Martinsohn, Jann Th. ; Raymond, Paul ; Knott, Trey ; Glover, Kevin A. ; Eg Nielsen, Einar ; Eriksen, Lars Bonde ; Ogden, Rob ; Casey, John ; Guillen, Jordi
in: Fish and Fisheries, vol: 20, issue: 2, pages: 391-401

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1111/faf.12343

 

DNA og discard – genetiske metoder og forbud mod udsmid af fisk

Eg Nielsen, Einar
Presented at:
Dansk Havforskermøde 2019

Type: Conference abstract for conference (Peer reviewed)

Status: Published     |    År: 2019

  PDF

Laksekvoter for fiskesæsonen 2019

Sivebæk, Finn ; Eg Nielsen, Einar ; Koed, Anders

Type: Net publication - Internet publication

Status: Published     |    År: 2019

 

Northern European Salmo trutta (L.) populations are genetically divergent across geographical regions and environmental gradients

Bekkevold, Dorte ; Höjesjö, Johann ; Eg Nielsen, Einar ; Aldvén, David ; Als, Thomas Damm ; Sodeland, Marte ; Kent, Matthew Peter ; Lien, Sigbjørn ; Hansen, Michael Møller
in: Evolutionary Applications (Online)

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    År: 2019     |    DOI: https://doi.org/10.1111/eva.12877

  PDF

Possible uses of genetic methods in fisheries under the EU Landing Obligation

Jacobsen, Magnus Wulf ; Hansen, Brian Klitgaard ; Eg Nielsen, Einar
part of: The European Landing Obligation , pages: 407-427, 2019, Springer Open

Type: Book chapter (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1007/978-3-030-03308-8_20

 

Replicated anthropogenic hybridisations reveal parallel patterns of admixture in marine mussels

Simon, Alexis ; Arbiol, Christine ; Eg Nielsen, Einar ; Couteau, Jérôme ; Sussarellu, Rossana ; Burgeot, Thierry ; Bernard, Ismaël ; Coolen, Joop W.P. ; Lamy, Jean‐Baptiste ; Robert, Stéphane ; Skazina, Maria ; Strelkov, Petr ; Queiroga, Henrique ; Cancio, Ibon ; Welch, John J. ; Viard, Frédérique ; Bierne, Nicolas
in: Evolutionary Applications

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    År: 2019     |    DOI: https://doi.org/10.1111/eva.12879

 

Species-specific detection and quantification of environmental DNA from marine fishes in the Baltic Sea

Knudsen, Steen Wilhelm ; Ebert, Rasmus Bach ; Hesselsøe, Martin ; Kuntke, Franziska ; Hassingboe, Jakob ; Mortensen, Peter Bondgaard ; Thomsen, Philip Francis ; Sigsgaard, Eva Egelyng ; Hansen, Brian Klitgaard ; Eg Nielsen, Einar ; Møller, Peter Rask
in: Journal of Experimental Marine Biology and Ecology, vol: 510, pages: 31-45

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2019     |    DOI: https://doi.org/10.1016/j.jembe.2018.09.004

2018
 

A microsatellite baseline for genetic stock identification of European Atlantic salmon (Salmo salar L.)

Gilbey, John ; Coughlan, Jamie ; Wennevik, Vidar ; Prodöhl, Paulo ; Stevens, Jamie R. ; Garcia De Leaniz, Carlos ; Ensing, Dennis ; Cauwelier, Eef ; Cherbonnel, Corrine ; Consuegra, Sofia ; Coulson, Mark W. ; Cross, Tom F. ; Crozier, Walter ; Dillane, Eileen ; Ellis, Jonathan S. ; García-Vázquez, Eva ; Griffiths, Andrew M. ; Gudjonsson, Sigurdur ; Hindar, Kjetil ; Karlsson, Sten ; Knox, David ; Machado-Schiaffino, Gonzalo ; Meldrup, Dorte ; Eg Nielsen, Einar ; Ólafsson, Kristinn ; Primmer, Craig R. ; Prusov, Sergey ; Stradmeyer, Lee ; Vähä, Juha Pekka ; Veselov, Alexey Je. ; Webster, Lucy M.I. ; McGinnity, Philip ; Verspoor, Eric
in: ICES Journal of Marine Science, vol: 75, issue: 2, pages: 662-674

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1093/icesjms/fsx184

  PDF

Genetic analyses reveal complex dynamics within a marine fish management area

Hansen, Jakob Hemmer ; Hüssy, Karin ; Baktoft, Henrik ; Huwer, Bastian ; Bekkevold, Dorte ; Haslob, Holger ; Herrmann, Jens-Peter ; Hinrichsen, Hans-Harald ; Krumme, Uwe ; Mosegaard, Henrik ; Eg Nielsen, Einar ; Reusch, Thorsten B. H. ; Storr-Paulsen, Marie ; Velasco, Andres ; von Dewitz, Burkhard ; Dierking, Jan ; Eero, Margit
in: Evolutionary Applications, vol: 12, pages: 830-844

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1111/eva.12760

 

Hvordan påvirker genetikken havalder hos vestjyske laks?

Bekkevold, Dorte ; Eg Nielsen, Einar

Type: Net publication - Internet publication

Status: Published     |    År: 2018

 

Laksekvoter for 2018

Sivebæk, Finn ; Eg Nielsen, Einar ; Koed, Anders

Type: Net publication - Internet publication

Status: Published     |    År: 2018

  PDF

Parallel evolution and adaptation to environmental factors in a marine flatfish

do Prado, Fernanda Dotti ; Vera, Manuel ; Hermida, Miguel ; Bouza, Carmen ; Pardo, Belén G. ; Vilas, Román ; Blanco, Andrés ; Fernández, Carlos ; Maroso, Francesco ; Maes, Gregory E. ; Turan, Cemal ; Volckaert, Filip A.M. ; Taggart, John B. ; Carr, Adrian ; Ogden, Rob ; Nielsen, Einar Eg ; Martínez, Paulino
in: Evolutionary Applications, vol: 11, issue: 8, pages: 1322-1341

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1111/eva.12628

 

Performance and precision of double digestion RAD (ddRAD) genotyping in large multiplexed datasets of marine fish species

Maroso, F. ; Hillen, J E J ; Pardo, B. G. ; Gkagkavouzis, K. ; Coscia, I. ; Hermida, M. ; Franch, R. ; Hellemans, B. ; Van Houdt, J. ; Simionati, B. ; Taggart, J. B. ; Nielsen, Einar Eg ; Maes, G. ; Ciavaglia, S. A. ; Webster, L. M. I. ; Volckaert, F. A. M. ; Martinez, P. ; Bargelloni, L. ; Ogden, R. ; AquaTrace, Consortium
in: Marine Genomics, vol: 39, pages: 64-72

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1016/j.margen.2018.02.002

 

Status for laksen og dens forvaltning i Danmark 2017

Koed, Anders ; Sivebæk, Finn ; Eg Nielsen, Einar

Type: Net publication - Internet publication

Status: Published     |    År: 2018

  PDF

The sceptical optimist: challenges and perspectives for the application of environmental DNA in marine fisheries

Hansen, Brian Klitgaard ; Bekkevold, Dorte ; Worsøe Clausen, Lotte ; Eg Nielsen, Einar
in: Fish and Fisheries, vol: 19, issue: 5, pages: 751-768

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2018     |    DOI: https://doi.org/10.1111/faf.12286

2017
 

Artsspecifik sporing og kvantificering af eDNA fra marine fisk i Østersøen

Knudsen, Steen Wilhelm ; Ebert, Rasmus Bach ; Hesselsøe, Martin ; Kuntke, Franziska ; Hassingboe, Jakob ; Mortensen, Peter Bondgaard ; Thomsen, Philip Francis ; Hansen, Brian Klitgaard ; Eg Nielsen, Einar ; Møller, Peter Rask
Presented at:
Dansk Havforskermøde

Type: Conference abstract for conference

Status: Published     |    År: 2017

 

Den skeptiske optimist: Udfordringer og perspektiver i anvendelse af eDNA til marin monitering og fiskeriforvaltning

Eg Nielsen, Einar ; Bekkevold, Dorte ; Hansen, Brian Klitgaard
Presented at:
Dansk Havforskermøde

Type: Conference abstract for conference

Status: Published     |    År: 2017

 

Extracting DNA from 'jaws': High yield and quality from archived tiger shark (Galeocerdo cuvier) skeletal material

Eg Nielsen, Einar ; Morgan, J. A T ; Maher, S. L. ; Edson, J. ; Gauthier, M. ; Pepperell, J. ; Holmes, B. J. ; Bennett, M. B. ; Ovenden, J. R.
in: Molecular Ecology Resources, vol: 17, issue: 3, pages: 431-442

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: https://doi.org/10.1111/1755-0998.12580

  PDF

Genetic diversity and connectivity within Mytilus spp. in the subarctic and Arctic

Mathiesen, Sofie Smedegaard ; Thyrring, Jakob ; Hansen, Jakob Hemmer ; Berge, Jørgen ; Sukhotin, Alexey ; Leopold, Peter ; Bekaert, Michaël ; Sejr, Mikael Kristian ; Eg Nielsen, Einar
in: Evolutionary Applications, vol: 10, issue: 1, pages: 39–55

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: https://doi.org/10.1111/eva.12415

  PDF

Geographic extent of introgression in Sebastes mentella and its effect on genetic population structure

Saha, Atal ; Johansen, Torild ; Hedeholm, Rasmus ; Eg Nielsen, Einar ; Westgaard, Jon-Ivar ; Hauser, Lorenz ; Planque, Benjamin ; Cadrin, Steven X. ; Boje, Jesper
in: Evolutionary Applications, vol: 10, issue: 1, pages: 77–90

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: https://doi.org/10.1111/eva.12429

 

Laksekvoter for fiskesæsonen 2017

Sivebæk, Finn ; Eg Nielsen, Einar ; Koed, Anders

Type: Net publication - Internet publication

Status: Published     |    År: 2017

  PDF

Population structure and connectivity of tiger sharks (Galeocerdo cuvier) across the Indo-Pacific Ocean basin

Holmes, Bonnie J. ; Williams, Samuel M. ; Otway, Nicholas M. ; Eg Nielsen, Einar ; Maher, Safia L. ; Bennett, Mike B. ; Ovenden, Jennifer R.
in: Royal Society Open Science, vol: 4, issue: 7

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2017     |    DOI: https://doi.org/10.1098/rsos.170309

 

The development of tools for tracing and evaluating the genetic impact of fish from aquaculture

Bargelloni, L. ; Nielsen, Einar Eg
in: Aquaculture, vol: 472, pages: 87
Presented at:
12th International Symposium on Genetics in Aquaculture

Type: Conference abstract in journal (Peer reviewed)

Status: Published     |    År: 2017

2016
 

A comprehensive survey on selective breeding programs and seed market in the European aquaculture fish industry

Chavanne, Hervé ; Janssen, Kasper ; Hofherr, Johann ; Contini, Franca ; Haffray, Pierrick ; Komen, Hans ; Eg Nielsen, Einar ; Bargelloni, Luca
in: Aquaculture International, vol: 24, issue: 5, pages: 1287-1307

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: https://doi.org/10.1007/s10499-016-9985-0

 

Er det genetik der bestemmer, hvor længe laks opholder sig i havet?

Bekkevold, Dorte ; Eg Nielsen, Einar ; Sivebæk, Finn

Type: Net publication - Internet publication

Status: Published     |    År: 2016

  PDF

Evaluating genetic traceability methods for captive-bred marine fish and their applications in fisheries management and wildlife forensics

Bylemans, Jonas ; Maes, Gregory E. ; Diopere, Eveline ; Cariani, Alessia ; Senn, Helen ; Taylor, Martin I. ; Helyar, Sarah ; Bargelloni, Luca ; Bonaldo, Alessio ; Carvalho, Gary ; Guarniero, Ilaria ; Komen, Hans ; Martinsohn, Jann Th ; Eg Nielsen, Einar ; Tinti, Fausto ; Volckaert, Filip A. M. ; Ogden, Rob
in: Aquaculture Environment Interactions, vol: 8, pages: 131-145

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: https://doi.org/10.3354/aei00164

 

Genetic structure of West Greenland populations of lumpfish Cyclopterus lumpus

Mayoral, Elsa Garcia ; Olsen, M. ; Hedeholm, R. ; Post, Søren Lorenzen ; Eg Nielsen, Einar ; Bekkevold, Dorte
in: Journal of Fish Biology, vol: 89, issue: 6, pages: 2625-2642

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: https://doi.org/10.1111/jfb.13167

 

Historical DNA documents long distance natal homing in marine fish

Bonanomi, Sara ; Therkildsen, Nina Overgaard ; Retzel, Anja ; Hedeholm, Rasmus Berg ; Pedersen, Martin Wæver ; Meldrup, Dorte ; Pampoulie, Christophe ; Hansen, Jakob Hemmer ; Grønkjær, Peter ; Eg Nielsen, Einar
in: Molecular Ecology, vol: 25, issue: 12, pages: 2727-2734

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: https://doi.org/10.1111/mec.13580

 

Kæmpelaksen fra Storå er ambassadør for en bestand i fremgang

Eg Nielsen, Einar ; Sivebæk, Finn

Type: Net publication - Internet publication

Status: Published     |    År: 2016

 

Laksekvoter for fiskesæsonen 2016

Sivebæk, Finn ; Eg Nielsen, Einar

Type: Net publication - Internet publication

Status: Published     |    År: 2016

 

Laksen i Storå skal fremover klare sig uden udsætninger

Sivebæk, Finn ; Koed, Anders ; Eg Nielsen, Einar ; Jepsen, Niels ; Aarestrup, Kim

Type: Net publication - Internet publication

Status: Published     |    År: 2016

 

Learning from ‘apparent consensus’ in TAC disputes: Exploring knowledge overlaps in LEK and genetic categorization of Atlantic cod

Hedeholm, R. B. ; Jacobsen, R. B. ; Eg Nielsen, Einar
in: Marine Policy, vol: 69, pages: 114-120

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2016     |    DOI: https://doi.org/10.1016/j.marpol.2016.04.020

 

Status på laksebestandene i danske vandløb

Sivebæk, Finn ; Eg Nielsen, Einar

Type: Net publication - Internet publication

Status: Published     |    År: 2016

 

Undgå indavl, hvis du udsætter ørreder i naturen

Sivebæk, Finn ; Eg Nielsen, Einar

Type: Net publication - Internet publication

Status: Published     |    År: 2016

2015
  PDF

Archived DNA reveals fisheries and climate induced collapse of a major fishery

Bonanomi, Sara ; Pellissier, Loïc ; Therkildsen, Nina Overgaard ; Hedeholm, Rasmus Berg ; Retzel, Anja ; Meldrup, Dorte ; Olsen, Steffen Malskær ; Nielsen, Anders ; Pampoulie, Christophe ; Hansen, Jakob Hemmer ; Wisz, Mary ; Grønkjær, Peter ; Eg Nielsen, Einar
in: Scientific Reports, vol: 5

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2015     |    DOI: https://doi.org/10.1038/srep15395

 

Arctic warming will promote Atlantic-Pacific fish interchange

Wisz, Mary ; Broennimann, O. ; Grønkjær, Peter ; Møller, Peter R. ; Olsen, Steffen M. ; Swingedouw, D. ; Hedeholm, R.D. ; Eg Nielsen, Einar ; Guisan, A. ; Pellissier, L.
in: Nature Climate Change, vol: 5, issue: 3, pages: 261-265

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2015     |    DOI: https://doi.org/10.1038/nclimate2500

 

Derfor bliver storlaks længere tid i havet

Sivebæk, Finn ; Eg Nielsen, Einar

Type: Net publication - Internet publication

Status: Published     |    År: 2015

 

Gene-associated markers can assign origin in a weakly structured fish, Atlantic herring

Bekkevold, Dorte ; Helyar, Sarah J. ; Limborg, Morten T. ; Eg Nielsen, Einar ; Hansen, Jakob Hemmer ; Worsøe Clausen, Lotte ; Carvalho, Gary R.
in: ICES Journal of Marine Science, vol: 72, issue: 6, pages: 1790-1801

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2015     |    DOI: https://doi.org/10.1093/icesjms/fsu247

 

Hvad kan du gøre for laksen?

Sivebæk, Finn ; Eg Nielsen, Einar ; Koed, Anders

Type: Net publication - Internet publication

Status: Published     |    År: 2015

 

Laksekvoter for fiskesæsonen 2015

Sivebæk, Finn ; Eg Nielsen, Einar ; Koed, Anders

Type: Net publication - Internet publication

Status: Published     |    År: 2015

 

Mating success and sexual selection in a pelagic copepod, Temora longicornis: Evidence from paternity analyses

Sichlau, Mie Hylstofte ; Eg Nielsen, Einar ; Thygesen, Uffe Høgsbro ; Kiørboe, Thomas
in: Limnology and Oceanography, vol: 60, issue: 2, pages: 600-610

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2015     |    DOI: https://doi.org/10.1002/lno.10052

 

Reply to 'Sources of uncertainties in cod distribution models'

Wisz, Mary ; Broennimann, Olivier ; Grønkjær, Peter ; Møller, P. D. R. ; Olsen, Steffen M. ; Swingedouw, D. ; Hedeholm, R.B. ; Eg Nielsen, Einar ; Guisan, A. ; Pellissier, Loïc
in: Nature Climate Change, vol: 5, issue: 9, pages: 790-791

Type: Comment/debate (Peer reviewed)

Status: Published     |    År: 2015     |    DOI: https://doi.org/10.1038/nclimate2762

  PDF

The history of cod in Greenland: A major fishery collapse explained by archived DNA

Eg Nielsen, Einar ; Bonanomi, Sara ; Pellissier, Loïc ; Therkildsen, Nina Overgaard ; Hedeholm, Rasmus ; Retzel, Anja ; Olsen, Steffen Malskær ; Nielsen, Anders ; Pampoulie, Christophe ; Hansen, Jakob Hemmer ; Wisz, Mary ; Grønkjaer, Peter
Presented at:
ICES Annual Science Conference 2015

Type: Conference abstract for conference

Status: Published     |    År: 2015

2014
 

Combination of genetics and spatial modelling highlights the sensitivity of cod (Gadus morhua) population diversity in the North Sea to distributions of fishing

Heath, Michael R. ; Culling, Mark A. ; Crozier, Walter W. ; Fox, Clive J. ; Gurney, William S. C. ; Hutchinson, William F. ; Eg Nielsen, Einar ; O'Sullivan, Martha ; Preedy, Katharine F. ; Righton, David A. ; Speirs, Douglas C. ; Taylor, Martin I. ; Wright, Peter J. ; Carvalho, Gary R.
in: ICES Journal of Marine Science, vol: 71, issue: 4, pages: 794-807

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2014     |    DOI: https://doi.org/10.1093/icesjms/fst185

 

Conserving marine biodiversity: insights from life-history trait candidate genes in Atlantic cod (Gadus morhua)

Hansen, Jakob Hemmer ; Therkildsen, Nina Overgaard ; Meldrup, Dorte ; Eg Nielsen, Einar
in: Conservation Genetics, vol: 15, issue: 1, pages: 213-228

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2014     |    DOI: https://doi.org/10.1007/s10592-013-0532-5

 

Laksekvoter for fiskesæsonen 2014

Sivebæk, Finn ; Eg Nielsen, Einar ; Koed, Anders

Type: Net publication - Internet publication

Status: Published     |    År: 2014

 

Outlier SNP markers reveal fine-scale genetic structuring across European hake populations (Merluccius merluccius)

Milano, I. ; Babbucci, M. ; Cariani, A. ; Atanassova, M. ; Bekkevold, Dorte ; Carvalho, G.R. ; Espiñeira, M. ; Fiorentino, F. ; Garofalo, G. ; Geffen, A.J. ; Hansen, J.H. ; Helyar, S.J. ; Eg Nielsen, Einar ; Ogden, R. ; Patarnello, T. ; Stagioni, M. ; Tinti, F. ; Bargalloni, L.
in: Molecular Ecology, vol: 23, issue: 1, pages: 118-135

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2014     |    DOI: https://doi.org/10.1111/mec.12568

 

The use of archived tags in retrospective genetic analysis of fish

Bonanomi, Sara ; Therkildsen, Nina Overgaard ; Hedeholm, Rasmus Berg ; Hansen, Jakob Hemmer ; Eg Nielsen, Einar
in: Molecular Ecology Resources, vol: 14, issue: 3, pages: 616-621

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2014     |    DOI: https://doi.org/10.1111/1755-0998.12211

2013
  PDF

A genomic island linked to ecotype divergence in Atlantic cod

Hansen, Jakob Hemmer ; Eg Nielsen, Einar ; Therkildsen, Nina O. ; Taylor, Martin I. ; Ogden, Rob ; Geffen, Audrey J. ; Bekkevold, Dorte ; Helyar, Sarah ; Pampoulie, Christophe ; Johansen, Torild ; Carvalho, Gary R.
in: Molecular Ecology, vol: 22, issue: 10, pages: 2653-2667

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2013     |    DOI: https://doi.org/10.1111/mec.12284

  PDF

Dansk fiskeris udnyttelse af discardforbuddet

Larsen, Erling ; Dalskov, Jørgen ; Eg Nielsen, Einar ; Kirkegaard, Eskild ; Nielsen, Johan Wedel ; Tørring, Poul ; Schou, Mogens

Type: Report

Status: Published     |    År: 2013

 

Exploring geovisualization symbology for landscape genetics

Aoidh, Eoin Mac ; Martinsohn, Jann Th. ; Maes, Gregory E. ; Cariani, Alessia ; Eg Nielsen, Einar
in: Transactions in G I S, vol: 17, issue: 2, pages: 267-281

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2013     |    DOI: https://doi.org/10.1111/j.1467-9671.2012.01349.x

 

Microevolution in time and space: SNP analysis of historical DNA reveals dynamic signatures of selection in Atlantic cod

Therkildsen, Nina Overgaard ; Hansen, Jakob Hemmer ; Als, Thomas Damm ; Swain, D.P. ; Morgan, M.J. ; Trippel, E.A. ; Palumbi, S.R. ; Meldrup, Dorte ; Eg Nielsen, Einar
in: Molecular Ecology, vol: 22, issue: 9, pages: 2424-2440

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2013

 

Seksuel selektion hos en pelagisk copepod, Temora longicornis

Sichlau, Mie Hylstofte ; Eg Nielsen, Einar ; Kiørboe, Thomas
Presented at:
17. Danske havforskermøde

Type: Conference abstract for conference

Status: Published     |    År: 2013

 

Spationtemporal SNP analysis reveals cryptic distribution shifts and signs of ongoing adaptation at the northern range margin for Atlantic cod

Therkildsen, Nina Overgaard ; Hansen, Jakob Hemmer ; Hedeholm, R.B. ; Wisz, M. ; Pampoulie, C. ; Meldrup, Dorte ; Bonanomi, Sara ; Retzel, A. ; Olsen, M.A. ; Eg Nielsen, Einar
Presented at:
Evolution meeting

Type: Conference abstract for conference

Status: Published     |    År: 2013

 

Spatiotemporal distribution and composition of mixed stock fishery of Atlantic cod (Gadus morhua) in West Greenlandic waters based on retrospective genetic analysis

Bonanomi, Sara ; Therkildsen, Nina Overgaard ; Hedeholm, Rasmus Berg ; Retzel, Anja ; Eg Nielsen, Einar
Presented at:
ICES Conference and NorMER Annual Meeting

Type: Conference abstract for conference

Status: Published     |    År: 2013

  PDF

Spatiotemporal SNP analysis reveals pronounced biocomplexity at the northern range margin of Atlantic cod Gadus morhua

Therkildsen, Nina Overgaard ; Hansen, Jakob Hemmer ; Hedeholm, R.B. ; Wisz, Mary ; Pampoulie, C. ; Meldrup, Dorte ; Bonanomi, Sara ; Retzel, A. ; Olsen, S.M. ; Eg Nielsen, Einar
in: Evolutionary Applications (Online), vol: 6, issue: 4, pages: 690-705

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2013     |    DOI: https://doi.org/10.1111/eva.12055

 

Tilbage til fremtiden; DNA analyse af historiske samlinger af torske-øresten fra Grønland

Eg Nielsen, Einar ; Therkildsen, Nina Overgaard ; Hansen, Jakob Hemmer ; Hedeholm, Rasmus ; Grønkjær, Peter
Presented at:
17. Danske havforskermøde

Type: Conference abstract for conference

Status: Published     |    År: 2013

 

Tissue specific haemoglobin gene expression suggests adaptation to local marine conditions in North Sea flounder (Platichthys flesus L.)

Larsen, P.F. ; Eg Nielsen, Einar ; Hansen, M.M. ; Wang, T. ; Meier, Kristian ; Pertoldi, C. ; Loeschcke, V.
in: Genes and Genomics, vol: 35, issue: 4, pages: 541-547

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2013     |    DOI: https://doi.org/10.1007/s13258-013-0101-9

 

Vækstvariabilitet hos Atlantisk torsk (Gadus morhua) nær den nordlige udbredelsesgrænse

Roe, Per ; Hedeholm, Rasmus ; Eg Nielsen, Einar ; Grønkjær, Peter
Presented at:
17. Danske havforskermøde

Type: Conference abstract for conference

Status: Published     |    År: 2013

 

Vandløbenes fisk

Hansen, Michael Møller ; Sivebæk, Finn ; Bekkevold, Dorte ; Eg Nielsen, Einar
part of: Naturen i Danmark. De ferske vande, pages: 179-219, 2013, Gyldendal, København

Type: Book chapter (Peer reviewed)

Status: Published     |    År: 2013

  PDF

Variability and connectivity of plaice populations from the Eastern North Sea to the Western Baltic Sea, and implications for assessment and management

Ulrich, Clara ; Boje, Jesper ; Cardinale, Massimiliano ; Gatti, Paul ; le Bras, Quentin ; Andersen, Michael ; Hansen, Jakob Hemmer ; Hintzen, Niels T. ; Jacobsen, Jonathan B. ; Jonsson, Patrik ; Miller, David C.M. ; Eg Nielsen, Einar ; Rijnsdorp, Adriaan D. ; Sköld, Mattias ; Svedäng, Henrik ; Wennhage, Håkan
in: Journal of Sea Research, vol: 84, pages: 40-48

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2013     |    DOI: https://doi.org/10.1016/j.seares.2013.04.007

2012
 

“AquaTrace” The development of tools for tracing and evaluating the genetic impact of fish from aquaculture

Eg Nielsen, Einar ; Bekkevold, Dorte ; Svåsand, Terje ; Bargelloni, Luca ; Martinez, Paulino ; Volckaert, Filip ; Ogden, Rob ; Martinsohn, Jann ; Carvalho, Gary ; Bernatchez, Louis ; Chavanne, Hervé ; Glover, Kevin ; Maes, Gregory ; Taylor, Martin ; Webster, Lucy

Type: Conference abstract for conference

Status: Published     |    År: 2012

 

Differences in salinity tolerance and gene expression between two populations of Atlantic cod (Gadus morhua) in response to salinity stress

Larsen, Peter Foged ; Eg Nielsen, Einar ; Meier, Kristian ; Olsvik, P.A. ; Hansen, M.M. ; Loeschcke, V.
in: Biochemical Genetics, vol: 50, issue: 5-6, pages: 454-466

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2012     |    DOI: https://doi.org/10.1007/s10528-011-9490-0

 

Environmental selection on transcriptome-derived SNPs in a high gene flow marine fish, the Atlantic herring (Clupea harengus)

Limborg, Morten ; Helyar, S.J. ; de Bruyn, M. ; Taylor, M.I. ; Eg Nielsen, Einar ; Ogden, R. ; Carvalho, G.R. ; Bekkevold, Dorte
in: Molecular Ecology, vol: 21, issue: 15, pages: 3686-3703

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2012     |    DOI: https://doi.org/10.1111/j.1365-294X.2012.05639.x

 

Fiskenens gener kan afsløre ulovligt fiskeri

Eg Nielsen, Einar
in: Aktuel Naturvidenskab, vol: 5, pages: 34-39

Type: Journal article

Status: Published     |    År: 2012

 

Gene-associated markers provide tools for tackling illegal fishing and false eco-certification

Eg Nielsen, Einar ; Cariani, Alessia ; Aoidh, Eoin Mac ; Maes, Gregory E ; Milano, Ilaria ; Ogden, Rob ; Taylor, Martin ; Hansen, Jakob Hemmer ; Babbucci, Massimiliano ; Bargelloni, Luca ; Bekkevold, Dorte ; Diopere, Eveline ; Grenfell, Leonie ; Helyar, Sarah ; Limborg, Morten T ; Martinsohn, Jann T ; McEwing, Ross ; Panitz, Frank ; Patarnello, Tomaso ; Tinti, Fausto ; Van Houdt, Jeroen K J ; Volckaert, Filip A M ; Waples, Robin S ; Albin, Jan E J ; Vieites Baptista, Juan M ; Barmintsev, Vladimir ; Bautista, José M ; Bendixen, Christian ; Bergé, Jean-Pascal ; Blohm, Dietmar ; Cardazzo, Barbara ; Diez, Amalia ; Espiñeira, Montserrat ; Geffen, Audrey J ; Gonzalez, Elena ; González-Lavín, Nerea ; Guarniero, Ilaria ; Jeráme, Marc ; Kochzius, Marc ; Krey, Grigorius ; Mouchel, Olivier ; Negrisolo, Enrico ; Piccinetti, Corrado ; Puyet, Antonio ; Rastorguev, Sergey ; Smith, Jane P ; Trentini, Massimo ; Verrez-Bagnis, Véronique ; Volkov, Alexander ; Zanzi, Antonella ; Carvalho, Gary R
in: Nature Communications, vol: 3, pages: Article no. 851

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2012     |    DOI: https://doi.org/10.1038/ncomms1845

  PDF

Improving the assessment and management of the plaice stock complex between the North Sea and the Baltic Sea

Ulrich, Clara ; Boje, Jesper ; Cardinale, Massimiliano ; Gatti, Paul ; le Bras, Quentin ; Andersen, Michael ; Hansen, Jakob Hemmer ; Hintzen, Niels T. ; Jacobsen, Jonathan B. ; Jonsson, Patrik ; Miller, David C.M. ; Eg Nielsen, Einar ; Rijnsdorp, Adriaan ; Svedäng, Henrik ; Wennhage, Håkan

Type: Paper

Status: Published     |    År: 2012

 

Monitoring adaptive genetic responses to environmental change

Hansen, M.M. ; Olivieri, I. ; Waller, D.M. ; Eg Nielsen, Einar
in: Molecular Ecology, vol: 21, issue: 6, pages: 1311-1329

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2012     |    DOI: https://doi.org/10.1111/j.1365-294X.2011.05463.x

 

Retrospective genomic analysis of Atlantic cod in Greenlandic Waters

Bonanomi, Sara ; Therkildsen, Nina Overgaard ; Eg Nielsen, Einar
Presented at:
European Marine Biology Symposium

Type: Poster

Status: Published     |    År: 2012

 

Sådan bevarer man storlaksen i de vestjyske vandløb

Eg Nielsen, Einar

Type: Net publication - Internet publication

Status: Published     |    År: 2012

 

The memory remains: application of historical DNA for scaling biodiversity loss

Eg Nielsen, Einar ; Bekkevold, Dorte
in: Molecular Ecology, vol: 21, issue: 7, pages: 1539-1541

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2012     |    DOI: https://doi.org/10.1111/j.1365-294X.2012.05498.x

 

The use of archived tags in retrospective genetic analysis of fish

Bonanomi, Sara ; Therkildsen, Nina Overgaard ; Hedeholm, Rasmus Berg ; Eg Nielsen, Einar
Presented at:
NorMER Annual Meeting 2012

Type: Poster

Status: Published     |    År: 2012

 

Unraveling biocomplexity of Northeast Atlantic herring stocks using SNP markers

Bekkevold, Dorte ; Limborg, Morten ; Helyar, Sarah ; Taylor, Martin ; Eg Nielsen, Einar ; Carvalho, Gary

Type: Conference abstract for conference

Status: Published     |    År: 2012

 

Where does the cod come from? Panels of gene‐associated markers provide vastly improved origin assignment in Atlantic cod (Gadus morhua)

Eg Nielsen, Einar ; Hansen, Jakob Hemmer ; Taylor, Martin ; Carvalho, Gary

Type: Conference abstract for conference

Status: Published     |    År: 2012

2011
 

Adaptive evolution in Atlantic cod: global and regional geographical scales

Hemmer-Hansen, Jakob ; Eg Nielsen, Einar ; Poulsen, Nina Aagaard ; Loeschcke, Volker ; Moen, Thomas ; Johansen, Torild ; Mittelholzer, Christian ; Taranger, Geir-Lasse ; Ogden, Rob ; Carvalho, Gary
Presented at:
European Society for Evolutionary Biology Congress

Type: Poster

Status: Published     |    År: 2011

 

Application of SNPs for population genetics of nonmodel organisms: new opportunities and challenges

Helyar, S.J. ; Hansen, Jakob Hemmer ; Bekkevold, Dorte ; Taylor, M. I. ; Ogden, R. ; Limborg, Morten ; Cariani, A. ; Maes, G. E. ; Diopere, E. ; Carvalho, G. R. ; Eg Nielsen, Einar
in: Molecular Ecology Resources, vol: 11, issue: Suppl.1, pages: 123-136

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2011     |    DOI: https://doi.org/10.1111/j.1755-0998.2010.02943.x

 

Gene expression analysis for the identification of selection and local adaptation in fishes

Larsen, Peter Foged ; Schulte, P.M. ; Eg Nielsen, Einar
in: Journal of Fish Biology, vol: 78, issue: 1, pages: 1-22

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2011     |    DOI: https://doi.org/10.1111/j.1095-8649.2010.02834.x

 

Historical DNA reveals signatures of recent fisheries- or climate-induced evolution in Atlantic cod, Gadus morhua

Therkildsen, Nina Overgaard ; Hansen, Jakob Hemmer ; Eg Nielsen, Einar
Presented at:
Gordon Research Conference on Ecological & Evolutionary Genomics

Type: Poster

Status: Published     |    År: 2011

 

Identification of single nucleotide polymorphisms in candidate genes for growth and reproduction in a nonmodel organism; the Atlantic cod, Gadus morhua

Hansen, Jakob Hemmer ; Eg Nielsen, Einar ; Meldrup, Dorte ; Mittelholzer, Christian
in: Molecular Ecology Resources, vol: 11, issue: Suppl. 1, pages: 71-80

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2011     |    DOI: https://doi.org/10.1111/j.1755-0998.2010.02940.x

  PDF

Microgeographical population structure and adaptation in Atlantic cod Gadus morhua: spatio-temporal insights from gene-associated DNA markers

Poulsen, Nina Aagaard ; Hemmer-Hansen, Jakob ; Loeschcke, V. ; Carvalho, G.R. ; Eg Nielsen, Einar
in: Marine Ecology Progress Series, vol: 436, pages: 231-243

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2011     |    DOI: https://doi.org/10.3354/meps09246

 

Microsatellite standardization and evaluation of genotyping error in a large multi-partner research programme for conservation of Atlantic salmon (Salmo salar L.)

Ellis, J.S. ; Gilbey, J. ; Armstrong, A. ; Balstad, T. ; Cauwelier, E. ; Cherbonnel, C. ; Consuegra, S. ; Coughlan, J. ; Cross, T.F. ; Crozier, W. ; Dillane, E. ; Ensing, D. ; de Leaniz, C.G. ; Garcia-Vazquez, E. ; Griffiths, A.M. ; Hindar, K. ; Hjorleifsdottir, S. ; Knox, D. ; Machado-Schiaffino, G. ; McGinnity, P. ; Meldrup, Dorte ; Eg Nielsen, Einar ; Olafsson, K. ; Primmer, C.R. ; Prodohl, P. ; Stradmeyer, L. ; Vaha, J.P. ; Verspoor, E. ; Wennevik, V. ; Stevens, J.R.
in: Genetica, vol: 139, issue: 3, pages: 353-367

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2011     |    DOI: https://doi.org/10.1007/s10709-011-9554-4

 

Of fish and SNPs: The potential of genetics for traceability in European fisheries management

Helyar, Sara ; Bekkevold, Dorte ; Hansen, Jakob Hemmer ; Limborg, Morten ; Eg Nielsen, Einar ; Carvalho, Gary R.
Presented at:
141st Annual Meeting American Fisheries Society

Type: Conference abstract for conference

Status: Published     |    År: 2011

 

Tracing fish and fish products from ocean to fork using advanced molecular technologies

Martinsohn, J.T. ; Geffen, A.J. ; Maas, G.E. ; Eg Nielsen, Einar ; Ogden, R. ; Waples, R.S. ; Carvalho, G.R.
part of: Food chain integrity: a holistic approach to food traceability, safety, quality and authenticity, 2011, Woodhead Publishing, Cambridge

Type: Book chapter (Peer reviewed)

Status: Published     |    År: 2011

2010
 

Does DNA extraction affect the physical and chemical composition of historical cod (Gadus morhua) otoliths?

Therkildsen, Nina Overgaard ; Eg Nielsen, Einar ; Hüssy, Karin ; Meldrup, Dorte ; Geffen, Audrey J.
in: ICES Journal of Marine Science, vol: 67, issue: 6, pages: 1251-1259

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2010     |    DOI: https://doi.org/10.1093/icesjms/fsq016

 

Genomic approaches in aquaculture and fisheries

Cancela, M. Leonor ; Bargelloni, Luca ; Boudry, Pierre ; Boulo, Viviane ; Dias, Jorge ; Huvet, Arnaud ; Laize, Vincent ; Lapegue, Sylvie ; Leite, Ricardo ; Mira, Sara ; Eg Nielsen, Einar ; Planas, Josep V. ; Roher, Nerea ; Sarropoulou, Elena ; Volckaert, Filip A. M. ; Cock, JM ; TessmarRaible, K ; Boyen, C ; Viard, F
part of: Introduction to Marine Genomics, pages: 213-286, 2011, Springer, Dordrecht

Type: Book chapter (Peer reviewed)

Status: Published     |    År: 2010     |    DOI: https://doi.org/10.1007/978-90-481-8639-6_7

 

Genomic signatures of local adaptation in natural populations of Atlantic cod: implications for interactions between aquaculture and wild cod populations

Eg Nielsen, Einar ; Hansen, Jakob Hemmer ; Poulsen, Nina Aagaard ; Loeschcke, Volker ; Moen, Thomas ; Johansen, Torild ; Mittelholzer, Christian ; Taranger, Geir-Lasse
Presented at:
ICES Council Meeting 2009

Type: Conference abstract for conference

Status: Published     |    År: 2010

 

Influences of environmental cues, migration history and habitat familiarity on partial migration

Skov, Christian ; Aarestrup, Kim ; Baktoft, Henrik ; Brodersen, Jakob ; Brönmark, Christer ; Hansson, Lars-Anders ; Eg Nielsen, Einar ; Nielsen, Tine ; Nilsson, Anders
in: Behavioral Ecology, vol: 21, issue: 6, pages: 1140-1146

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2010     |    DOI: https://doi.org/10.1093/beheco/arq121

 

Large effective population size and temporal genetic stability in Atlantic cod (Gadus morhua) in the southern Gulf of St. Lawrence

Therkildsen, Nina Overgaard ; Eg Nielsen, Einar ; Swain, Douglas P. ; Pedersen, Jes Søe
in: Canadian Journal of Fisheries and Aquatic Sciences, vol: 67, issue: 10, pages: 1585-1595

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2010     |    DOI: https://doi.org/10.1139/F10-084

 

Using historical DNA to study fisheries-induced genetic change in Atlantic cod (Gadus morhua)

Therkildsen, Nina Overgaard ; Hansen, Jakob Hemmer ; Eg Nielsen, Einar
Presented at:
ICES Council Meeting 2010

Type: Conference abstract for conference

Status: Published     |    År: 2010

 

Using historical DNA to study fisheries ‐ induced genetic change in commercial fish stocks

Therkildsen, Nina Overgaard ; Hansen, Jakob Hemmer ; Eg Nielsen, Einar
Presented at:
Oceans Past III Stories from the sea - history of marine animal populations and their exploitation, November 18-20

Type: Conference abstract for conference

Status: Published     |    År: 2010

 

Using the candidate gene approach to study fisheries-induced evolution

Therkildsen, Nina Overgaard ; Hansen, Jakob Hemmer ; Eg Nielsen, Einar
Presented at:
Evolutionary Potential in Natural Populations,

Type: Poster

Status: Published     |    År: 2010

2009
 

Effective population size and temporal genetic stability in Atlantic cod (Gadus morhua) in the southern Gulf of St. Lawrence

Therkildsen, Nina Overgaard ; Eg Nielsen, Einar ; Swain, D. P. ; Pedersen, J. S.
Presented at:
ESF Conservation Genetics Conference: Integrating Population Genetics and Conservation Biology

Type: Poster

Status: Published     |    År: 2009

  PDF

Genomic signatures of local directional selection in a high gene flow marine organism, the Atlantic cod (Gadus morhua)

Eg Nielsen, Einar ; Hansen, Jakob Hemmer ; Poulsen, Nina Aagaard ; Loeschske, Volker ; Moen, Thomas ; Johansen, Torild ; Mittelholzer, Christian ; Taranger, Geir-Lasse ; Ogden, Rob ; Carvalho, Gary R.
in: B M C Evolutionary Biology, vol: 9, pages: 276

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2009     |    DOI: https://doi.org/10.1186/1471-2148-9-276

 

Micro geographical population structure of cod Gadus morhua in the North Sea and west of Scotland: the role of sampling loci and individuals

Eg Nielsen, Einar ; Wright, Peter John ; Hansen, Jakob Hemmer ; Poulsen, Nina Aagaard ; Gibb, Lain Monroe ; Meldrup, Dorte
in: Marine Ecology Progress Series, vol: 376, pages: 213-225

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2009     |    DOI: https://doi.org/10.3354/meps07798

 

Population genomics of marine fishes: identifying adaptive variation in space and time

Eg Nielsen, Einar ; Hansen, Jakob Hemmer ; Larsen, Peter Foged ; Bekkevold, Dorte
in: Molecular Ecology, vol: 18, issue: 15, pages: 3128-3150

Type: Journal article (Peer reviewed)

Status: Published     |    År: 2009     |    DOI: https://doi.org/10.1111/j.1365-294X.2009.04272.x

 

Støtteopdræt - en succeshistorie for den vestjyske laks?

Eg Nielsen, Einar
in: Miljø- & vandpleje, issue: 33, pages: 16-23

Type: Journal article

Status: Published     |    År: 2009