Publikationer

Abstract Background Shallow nearshore marine ecosystems are changing at an increasing rate due to a range of human activities such as urbanisation and commercial development. As a result, an increasing number of structural modifications occur in coastal nursery and spawning habitats of fish. Concomitant to this increase, there have been declines in many coastal fish populations and changes in the composition of fish communities. As requested by Swedish stakeholders, this review aimed to synthesise scientific evidence of the impact on fish recruitment of structural modifications in temperate coastal areas. Methods We searched for peer-reviewed and grey literature on such impacts in English, Dutch, Danish, Finnish, German, Swedish and Spanish. Searches were performed in bibliographic databases, specialist websites, bibliographies of review articles. We also contacted stakeholder to find relevant literature. Eligible studies included small- and large-scale field studies in marine systems and large lakes (> 10,000 km2) in temperate regions of the Northern and Southern Hemispheres. Included replicated comparisons of fish recruitment between altered and unaltered control areas, comparisons before and after an alteration, or both. Relevant outcomes (response variables) included measures of recruitment defined as abundance of juvenile fish in coastal habitats. All fish species were considered. Articles were screened for eligibility by title, abstract and full text. Eligible studies were critically appraised based on their external and internal validity. From each eligible study of sufficient validity, we extracted information on study design, measured outcomes, exposure, type of comparator, effect modifiers and study findings. Study findings were synthesised narratively. Results We searched for eligible studies in 15 databases, 24 specialist websites, Google Scholar, and bibliographies of 11 review articles. The review finally included 37 studies that were eligible and of sufficient validity to be considered for final synthesis. Most studies (23 of 37) were from the Northern Hemisphere. Studies varied in design, spatial resolution, target fish species, and type of structural habitat change. This high level of variation did not allow for a quantitative synthesis and prevented us from drawing general conclusions on the impact of structures or structural modifications on fish recruitment. In this review we provide a narrative synthesis of the evidence base and classify eligible studies into six categories (based on type of exposure and comparator). The categories are as follows: the impacts on fish recruitment of: (1) artificial structures in coastal areas, (2) structures designed as fish attractors, (3) large scale urban sprawl, (4) ‘novel’ habitats, (5) habitat loss, and (6) restoration. Conclusions This review revealed a very limited evidence base for how structural modifications and marine urban sprawl can affect fish recruitment. Thus, there is a substantial mismatch between stakeholder needs and research evidence. Further, the impact and ecological performance of artificial structures depend both on context and species. Clearly, there is a need for more research on the subject, especially on long-term consequences at larger spatial scales.

The introduction of landing obligations in the European Union common fisheries policy, has increased the focus on discard survival. Since species with scientifically proven high survival rates may be exempted from the landing obligations, the economic significance for the fishing industry is large. Landing obligations include individuals below the minimum conservation reference size (MCRS), which are not allowed to be sold for human consumption. The Norway lobster (Nephrops norvegicus) fishery is a high value fishery, but with a substantial amount of bycatch of plaice (Pleuronectes platessa) below the MCRS. In the present study, observations were made on the short‐term survival of plaice at or below the MCRS, discarded from a small otter board trawler targeting Nephrops in Skagerrak (ICES 3a). The average short‐term survival of plaice was 15% at haul level, ranging from 0% to 39%, after 10 days of captive observation. Survival significantly decreased with time on deck and the retention of debris in the codend (p < 0.0001), while survival was not correlated to size. Vitality assessments, using a combined reflex impairment and injury score, were tested as predictor of survival and were significantly associated to survival (p < 0.0001) both for individual fish and when grouped by hauls. Seabird predation behaviour was assessed and it was estimated that seabirds predated or pursued 85% of discarded plaice below the MCRS.

Meat quality is a complex trait that is influenced by genetic and environmental factors, which includes mineral concentration. However, the association between mineral concentration and meat quality, and the specific molecular pathways underlying this association, are not well explored. We therefore analyzed gene expression as measured with RNA-seq in Longissimus thoracis muscle of 194 Nelore steers for association with three meat quality traits (intramuscular fat, meat pH, and tenderness) and the concentration of 13 minerals (Ca, Cr, Co, Cu, Fe, K, Mg, Mn, Na, P, S, Se, and Zn). We identified seven sets of co-expressed genes (modules) associated with at least two traits, which indicates that common pathways influence these traits. From pathway analysis of module hub genes, we further found an over-representation for energy and protein metabolism (AMPK and mTOR signaling pathways) in addition to muscle growth, and protein turnover pathways. Among the identified hub genes FASN, ELOV5, and PDE3B are involved with lipid metabolism and were affected by previously identified eQTLs associated to fat deposition. The reported hub genes and over-represented pathways provide evidence of interplay among gene expression, mineral concentration, and meat quality traits. Future studies investigating the effect of different levels of mineral supplementation in the gene expression and meat quality traits could help us to elucidate the regulatory mechanism by which the genes/pathways are affected.